Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSDVAIVKEGWLHKRGEYIKTWRPRYFLLKNDGTFIGYKERPQDVDQREAPLNNFSVAQCQLMKTERPRPNTFIIRCLQWTTVIERTFHVETPEEREEWTTAIQTVADGLKKQEEEEMDFRSGSPSDNSGAEEMEVSLAKPKHRVTMNEFEYLKLLGKG-TFGKVILVKEKAT-GRYYAMKILKKEVIVAKDEVAHTLTENRVLQ--NSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSR-ERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLD-KDGHIKITDFGLCKEGIKDGATMK--TFCGTPEYLAPEVLEDN---DYGRAVDWWGLGVVMYEMMCG-RLPFY--NQDHEKLFELILMEEIRFP-RTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIV---WQHVYEKKLSPPFKPQVTSETDTRYFDEEFTAQMITITPPDQDDSMECVDSERRPHFPQFSYSASGTA
1CDK Chain:A ((8-350))---------------------KG-------------------------------------------------------------------------------------SEQESVKEFLAKAKEDFLKKWENPAQNTA------H--LDQFERIKTLGT-GSFGRVMLVKHKETG-NHFAMKILDKQKVVKLKQIEHTLNEKRILQAV--NFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHS-LDLIYRDLKPENLLIDQ-QGYIQVTDFGFAKRV-K--G--RTWTLCGTPEYLAPEIILS-KGY--NKAVDWWALGVLIYEMAAGY-PPFFAD--QPIQIYEKIVSGKVRFPS-HFSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFA---TTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRVSI--------NEKCGKEFSEF-----------


General information:
TITO was launched using:
RESULT:

Template: 1CDK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -136054 for 2581 contacts (-52.7/contact) +
2D Compatibility (PS) -34560 + (NN) -11720 + (LL) 9116
1D Compatibility (HY) -27600 + (ID) 6550
Total energy: -207368.0 ( -80.34 by residue)
QMean score : 0.419

(partial model without unconserved sides chains):
PDB file : Tito_1CDK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1CDK-query.scw
PDB file : Tito_Scwrl_1CDK.pdb: