Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAMTGSTPCSSMSNHTKERVTMTKVTLENFYSNLIAQHEEREMRQKKLEKVMEEEGLKDEEKRLRRSAHARKETEFLRLKRTRLGLEDFESLKVIGRG-AFGEVRLVQKKDT-GHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLW------VVKMFYSFQDKL-NLYLIMEFLPGGDMMTLLMKKD-TLTEEETQFYIAETVLAIDSIH-QLGFIHRDIKPDNLLLDSK-GHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQT---GYNKLCDWWSLGVIMYEMLIGY-PPFCSETPQETYKKVMNWKETLTFPPEVPISEKAKDLILRFCCEWEHRIGAPGVEEIKSNSFFEGVDWEHIRERPAAISIEIKSIDDTSNFDEFPE--SDILKPTVATSNHPETDYKNKDWVFINYTYKRFEGLTARGAIPSYMKAAK------------------- |
| 1CDK Chain:A ((8-350)) | ---------------------------------------------KGSEQESVKEFLAKAKEDFLKKWENPAQNTA------H--LDQFERIKTLGT-GSFGRVMLVKHKETG-NHFAMKILDKQKVVK------LKQIEHTLNEKRILQAVNFPFLVKLEYSFKDN-SNLYMVMEYVPGGEMFSHLRR-IGRFSEPHARFYAAQIVLTFEYLHS-LDLIYRDLKPENLLIDQ-QGYIQVTDFGFAKRV-K--G--RT---------------------------------WTLCGTPEYLAPEIILS-KGY--NKAVDWWALGVLIYEMAAG-YPPFFAD-------QPIQIYEKIVSGKVRFPS--------------------------------------HFSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFA-------TTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRVSINEKCGKEFSEF |
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General information:
TITO was launched using:
| RESULT:
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Template: 1CDK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -119690 for 2377 contacts (-50.4/contact) +
2D Compatibility (PS) -32795 + (NN) -10827 + (LL) 9844
1D Compatibility (HY) -21200 + (ID) 4700
Total energy: -179368.0 ( -75.46 by residue)
QMean score : 0.314
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