Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPKLSIVVAPDERLTTRASEVTG---INDKIKELVNDMFETMYNAEGLGLAAVQIGVLKRIFVMDIQLEDIKGEPVGYESTGKFCMINPEITELSDEQVILKEGCLSIPEQSHEIRRPKYLTVKYKDLNNKEQTLKASGWLARCIQHELDHLNGILYIRHLSKLKYDMAMKKAEKFKRHYER
1Y6H Chain:A ((1-173))-SVRKILRMGDPILRKISEPVTEDEIQTKEFKKLIRDMFDTMRHAEGVGLAAPQIGILKQIVVVGSEDNERY---PGTPDVPERIILNPVITPLTKDTSGFWEGCLSVPGMRGYVERPNQIRMQWMDEKGNQFDETIDGYKAIVYQHECDHLQGILYVDRLKDTKLFGFNETLDSSHNVLD-


General information:
TITO was launched using:
RESULT:

Template: 1Y6H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -82545 for 1297 contacts (-63.6/contact) +
2D Compatibility (PS) -18224 + (NN) -861 + (LL) 100
1D Compatibility (HY) -8800 + (ID) 2750
Total energy: -113080.0 ( -87.19 by residue)
QMean score : 0.389

(partial model without unconserved sides chains):
PDB file : Tito_1Y6H.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1Y6H-query.scw
PDB file : Tito_Scwrl_1Y6H.pdb: