Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGRIQRNKIKVEIKKLSHGKDLPLPCYATMQSAGMDLYAALGNSIVLNPLERLLIPTGIVIVIPNGFEGQIRPRSGLAAKYGITVLNSPGTIDSDYRGEVKVCLINLSNQPYEIKRGDRIAQILIAPVFRVIWDDAERLCTEETERSAGGFGSSGR
2OKE Chain:B ((22-131))
------------------------PTRQSPGAAGYDLYSAYDYTIP--PGERQLIKTDISMSMPKFCYGRIAPRSGLSLK-GIDI--GGGVIDEDYRGNIGVILINNGKCTFNVNTGDRIAQLIYQRIYYPELEEVQSL-----------------
General information:
TITO was launched using:
RESULT:
Template:
2OKE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -56964 for 707 contacts (-80.6/contact) +
2D Compatibility (PS) -11587 + (NN) -1670 + (LL) 2120
1D Compatibility (HY) -8400 + (ID) 2200
Total energy: -78701.0 ( -111.32 by residue)
QMean score : 0.212
(partial model without unconserved sides chains):
PDB file :
Tito_2OKE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OKE-query.scw
PDB file :
Tito_Scwrl_2OKE.pdb
: