Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKMEACYSFDDILLLPAYSNILPCNADTKTYLTNSIELNIPLISSAMDTVTESDFAITIAQHGGIGCIHKNLSVDEQVSEVRRVKKYENWIVYNPITISPDKTVAEAISLMKKHDYSGIPVVDQRKLVGVLTNRDIRFIEDQNMSIKVSEVMTKEKLVTIREQEVDSASAMKLLHENRIEKLLVIDENFCCIGLITVKDIEKYNRYPNSCKDSKGRLRVAAAVGTGKKDGIERCEALIGEEIDVIIVDTAHGHSENVIDTIKEIKTMYPNTQLVGGNIATKEAAEALIDAGVDAVKVGIGPGSICTTRVVTGVGVPQFSAIQSVAETCKARKVRLIADGGIKYSGDIAKAIAAGADSVMIGSIFAGTDESPGEIIMYKGRAYKGYRGMGSISAMKQGSASRYFQDKDSKLKLVPQGVEGRVPFKGPASGVIHQLIGGLQAAMGYTGNRNIEEMKKNCRFVIITASGLRESHAHDIIITQEAPNYAYQVFNLLTDSDA |
3FFS Chain:A ((4-379)) | -KNIGKGLTFEDILLVPNYSEVLPREVSLETKLTKNVSLKIPLISSAMDTVTEHLMAVGMARLGGIGIIHKNMDMESQVNEV---LKVKNWI--------------------------------------------------------------------------------------------------------------AYSN---ENLDNKGRLRVGAAIGV---N-IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSKM-NIDVIVGNVVTEEATKELIENGADGIKVGI---------IVAGVGVPQITAIEKCSSVASKFGIPIIADGGIRYSGDIGKALAVGASSVMIGSILAGTEESPGEKELIGDTVYKY-----------------------------------RVKYKGEMEGVVYQLVGGLRSCMGYLGSASIEELWKKSSYVEITTS-------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FFS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -185298 for 2560 contacts (-72.4/contact) +
2D Compatibility (PS) -32282 + (NN) -8556 + (LL) 13172
1D Compatibility (HY) -32000 + (ID) 7800
Total energy: -252764.0 ( -98.74 by residue)
QMean score : 0.514
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