Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLDKTTKNLLITEINKILPE--DSQNRLISAVRYVLLAPAKHIRPFLVVASSQVFNVEIERVISIAMAVECIHTYSLIHDDLPCMDNSDTRRGQLSCHKRFDKATAVLAGDALLTLAFEILSSLNE---GSNKRCEIIKALSQAIGAKGMVGGQILDIKTALHVIQHHDYLDPESSVINEHTRQLCNKNRTLGSCAKITPDSKIKEIHLMKTAKLFAASCEIGAII-GSATDKQRRALYNYGVNLGLIFQAKDDIRDYKQDEV-NNLMSMLSKSEIENYIDNLFKQALDNLGELSGDTNYLYNLLNQVKRDD |
| 3LOM Chain:A ((16-301)) | -----YTQRHELYLEQLLNEIIIPAPQIRSALHYALFSGGKRIRPILVYLAGDLIDVDQGVLDIIAAALELTHCYSLIHDDLPAMDNDDLRRGKPSCHKAFDEATAILVGDGMQALAIEVLLMRLSPLLPAAQVVAITQVLVNASGISGMVSGQSLDLSELAKS---------------------------------SVTEEQLREIHLLKTGKLILACFEMVLAAQHEVSEQIKSALRTYGKHIGLVFQMQDDYLDLYAP--KTTFATLFNKQQLEEEIAVHYQIAMDSLRLFGSKAAALIELTKQLQNRS |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LOM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -160239 for 2081 contacts (-77.0/contact) +
2D Compatibility (PS) -28139 + (NN) -10566 + (LL) 2420
1D Compatibility (HY) -16800 + (ID) 4550
Total energy: -217874.0 ( -104.70 by residue)
QMean score : 0.576
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