Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLNEIQILN-NGYPMPSVGLGVYKISDEDMTKVVNAAIDAGYRAFDTAYFYDNEASLGRALKD----NGVDREDLFITTKLWNDYQGYEKTFEYFNKSIENLQTDYLDLFLIHWPCE-AD-----------------GLFLETYKAMEELYEQGKVKAIGVCNFNVHHLEKLMAQS--SIKPMVNQIEVHPYFNQQELQEFCDRHDIKVTAWMPLMRNRGLL---------DNPVIVKIAEKYHKTPAQVVLRWHLAHNRIIIPKSQTPKRIQENIDILDFNLELTEVAEIDALDRNARQGKNPDDVKIGDLK |
| 1US0 Chain:A ((1-301)) | --MASRILLNNGAKMPILGLGTWKSPPGQVTEAVKVAIDVGYRHIDCAHVYQNENEVGVAIQEKLREQVVKREELFIVSKLWCTYHEKGLVKGACQKTLSDLKLDYLDLYLIHWPTGFKPGKEFFPLDESGNVVPSDTNILDTWAAMEELVDEGLVKAIGISNFNHLQVEMILNKPGLKYKPAVNQIECHPYLTQEKLIQYCQSKGIVVTAYSPLGSPDRPWAKPEDPSLLEDPRIKAIAAKHNKTTAQVLIRFPMQRNLVVIPKSVTPERIAENFKVFDFELSSQDMTTLLSYNRNWRVCAL---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1US0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -133712 for 2268 contacts (-59.0/contact) +
2D Compatibility (PS) -29035 + (NN) -14693 + (LL) 544
1D Compatibility (HY) -22800 + (ID) 5550
Total energy: -205246.0 ( -90.50 by residue)
QMean score : 0.513
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