Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTQTVNVIGAGLAGSEAAYQLAERGIKVNLIEMRPVKQTPAHHTDKFAELVCSNSLRGNALTNGVGVLKEEM----RRLNSIIIEAADKAR--V--P-AGGALAVDRHDFSGYITETLKNHENITVINEEI-------NAIPDGYTIIATGPLTTETLAQEIVDITGKDQLYFYDAAAPIIEKESIDMDKVYLKSRYDKGEAAYLNCPMTEDEFNRFYDAVLEAEVAPVNSFEKEKYFEGCMPFEVMAERGRKTLLFGPMKPVGLEDPKTGKRPYAVVQLRQDDAAGTLYNIVGFQTHLKWGAQKEVIKLIPGLENVDIVRYGVMHRNTFINSPDVLNEKYELISQPNIQFAGQMTGVEGYVESAASGLVAGINLAHKILGKGEVVFPRETMIGSMAYYISHAKNNKNFQPMNANFGLLPSLETRIKDKKERYEAQANRALDYLENFKKTL |
| 3IHM Chain:A ((3-148)) | --KRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRKPDEYSG---LRLLNTVAHNAVTVQR---EVALDVNEWPSEEFGYFGHYYYVGGPQPMRFYGDLKAPSRAVDYRLYQPMLMRALEAR-GGKFCYDAVSAEDLEGLSEQYDLLVVCTGKYAL-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IHM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -20399 for 873 contacts (-23.4/contact) +
2D Compatibility (PS) -13623 + (NN) 428 + (LL) 20764
1D Compatibility (HY) -8400 + (ID) 900
Total energy: -22130.0 ( -25.35 by residue)
QMean score : 0.351
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