Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKVLIINGAKAFGHSGG-KLNETLTHHAKKILESL--GLEVDTTIVDKG--------------------------YEKSQEVEKFFSADATIWQMPGWWMGEPWIVKKYIDEVFTSGHGKLYASDGRSSQNPTKNYGKGGLMQGKKYMLSLTWNAPIEAFNDPSEFFEGVGVDVVYLHLHKAFQFLGLSALPTFICNDVMKN-PQVEQYLNSLTVHLRQAFGK |
1T5B Chain:A ((1-198)) | MSKVLVLKSSIL----AGYSQSGQLTDYFIEQWREKHVADEITVRDLAANPVPVLDGELVGAMRDAPLTPRQQDALALSDELIAELKAHDVIVIAAPMYNFNIPTQLKNYFDLIARAGITFRYTEK-----------GPEGLVTGKRAVVLSSRGGIHKDTPT----------DLIAPYLKVFLGFIGITDVNFVFAEGIAYGPEVAAKAQADAKAAIDSVVAA |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1T5B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -70052 for 1276 contacts (-54.9/contact) +
2D Compatibility (PS) -18017 + (NN) -8138 + (LL) 220
1D Compatibility (HY) -3600 + (ID) 1250
Total energy: -100837.0 ( -79.03 by residue)
QMean score : 0.602
|
|
|