Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MENYSHRFQVNLAGMIDILSNHLYDEKDVYIRELLQNATDAIRARKKI--DS----TLEGKIHASLTGDNNEKTLIIEDNGIGLTEDEVHAFLATIANSSKGEKNFDGESSNDFIGRFGIGLLSCFIVSDEIVMISTSQKDGGTTEWRGKADGTYSVRKIE-TDTREPGTQVYLRLRAGLEDHPECEDVEYLINTLKKYGASLESNIIVEMNG--LEEEINSWTKQFSDKETLSTLSREQIIQYGEYILG--THFQDYFLIENES-GRTFGIAYMIPHAVQMNAIRKNTVFLNKMFVTSEANNILPDWSFFAKCVIWTDELQPVASREAFYKNERLTSVASELGVALKKGIETLPEEAL-MKLLATHYLGFKALASEDAPFLKLIYPYLPVRTLN---GEEKLGDIIA----KNDVIYYTYSVDDFRQIK-----DIARSSGMTLINGGYSYDSPILAQLSYFVEGTEFVLIQPEEMTDKLRP----MTADEKQAYQPILTEMNS-MMAEFDTDVLIKHFEPKDLPIIFIHSTATQELRELERAVEETTSVFSDILESIQKEQEPAPLAHLYLNLDNELIKRLFTSEKT---VKELSVIVNVLYIQALLLGHYPLKRKEMVLMNQNMLRILEML |
| 2O1U Chain:A ((34-657)) | --------------MMKLIINSLYKNKEIFLRELISNASDALDKIRLISLTDENALAGNEELTVKIKCDKEKNLLHVTDTGVGMTREELVKNLGT------------------------VGFYSAFLVADKVIVTSKHNND-TQHIWESDS-NEFSVIADPRGNTLGRGTTITLVLKEEAS---DYLELDTIKNLVKKYSQFINFPIYVWSSKVWDWELMNDIKPIWQRPSK--EVEDDEYKAFYKSFSKESDDPMAYIHFTAEGEVTFKSILFVPTSAPR-----YIKLYVRRVFITDDFHDMMPKYLNFVKGVVDSDDLPLNVSRETLQQHKLLKVIRKKLVRKTLDMIKKIADEKYNDTFWKEFGTNIKLGVIEDHSNRTRLAKLLRFQSSHHPSDITSLDQYVERMKEKQDKIYFMAGSS-RKEAESSPFVERLLKKGYEVIYLTEPVDEYCIQALPE-FDGKRFQNVAKEGVKFDESEKTKESREAIEKEFEPLLNWMKDKALKD-KIEKAVVSQRLTESPCALVASQY-GWSGNMERIMKA-QAYQTGKDISTN--YYASQKKTFEINPRHPLIKDMLRRVKEDEDDKTVSDLAVVLFETATLRSGYLL--PDTKAYGDRIERMLRL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2O1U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -223726 for 4142 contacts (-54.0/contact) +
2D Compatibility (PS) -57437 + (NN) -15695 + (LL) 2248
1D Compatibility (HY) -24400 + (ID) 5150
Total energy: -324160.0 ( -78.26 by residue)
QMean score : 0.477
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