Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTLSIKSIDSFEKDSIVEEVASLVFAGFKSKFTKTLFKETEAHDITYAFCHYIYTEKGENLLIAIQDELVCGCLFVTSKSDSYQKLYQTLRKFLSFSQCLKLIFLLSLLSHKPVQNERYIDFITVSPNFRGQGIGKTLISHCLETFHD---EKITLYVAKKNSGAYKLYRNLGFQVIQKENSTLMGVLTGIKEWRKMEWIQLNVGKK
1U6M Chain:A ((2-189))
---SLIRSATKEDGQAIARLVLVILKDMELPILEEVSEEQMIDLLAEATAYPTYRYGYQRILVYEHAGEVAGIAVGYPAEDE-KIIDEPLREVFKKHG--LAEDVRLFIEEETLPNEWYLDTISVDERFRGMGIGSKLLDALPEVAKASGKQALGLNVDFDNPGARKLYASKGFKDVTTMTISGHLYNHMQKEV-------------
General information:
TITO was launched using:
RESULT:
Template:
1U6M.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -71969 for 1412 contacts (-51.0/contact) +
2D Compatibility (PS) -19121 + (NN) -113 + (LL) 1960
1D Compatibility (HY) -4800 + (ID) 1850
Total energy: -95893.0 ( -67.91 by residue)
QMean score : 0.455
(partial model without unconserved sides chains):
PDB file :
Tito_1U6M.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1U6M-query.scw
PDB file :
Tito_Scwrl_1U6M.pdb
: