Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLENDIKKVLYSEEDIILKTKELGAKLTADYAGKNPLLVGVLKGSVPFMAELLKHIDTHVEIDFMVVSSYHGGTTSSGEVKILKDVDTNIEGRDVIFIEDIIDTGRTLKYLRDMFKYRQANSVKVATLFDKPEGRLVDIDADYVCYDIPNEFIVGFGLDYAENYRNLPYVGVLKEEIYSK
3ACD Chain:A ((4-179))
MFTPGNGPVQISAEAIKKRVEELGGEIARDYQGKTPHLICVLNGAFIFMADLVRAIPLPLTMDFIAIS------------ELLKDLRLPIHGRDVIVVEDIVDTGLTLSYLLDYLEARKPASVRVAALLSKPSRRQVEVPIHYLGFEIEDAYVYGYGLDRAQFDRNLPFITSIRPE----
General information:
TITO was launched using:
RESULT:
Template:
3ACD.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -116074 for 1291 contacts (-89.9/contact) +
2D Compatibility (PS) -18108 + (NN) -6770 + (LL) 268
1D Compatibility (HY) -18000 + (ID) 3350
Total energy: -162034.0 ( -125.51 by residue)
QMean score : 0.562
(partial model without unconserved sides chains):
PDB file :
Tito_3ACD.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ACD-query.scw
PDB file :
Tito_Scwrl_3ACD.pdb
: