Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSEKNAYAKSGVDVEAGYEVVERIKKHVARTERAGVM--GALGGFGGMFDLSQTGVK-EPVLISGTDGVGTKLMLAIKYDKHDTIGQDCVAMCVNDIIAAGAEPLYF-LDYVATGKNEPAKLEQVVAGVAEGCVQAGAALIGGETAEMPGMYGEDDYDLAGFAVGVAEKSQIIDGSKVKEGDILLGLASSGIHSNGYSLVRRVFADYTGDEVLPELEGKQLKDVLLEPTRIYVKAALPLIKEELVNGIAHITGGGFIENVPRMFAD-DLAAEIDEDKVPVLPIFKALEKYGDIKHEEMFEIFNMGVGLMLAVSPENVNRVKELLD-----EPVYEIGRIIKKADAS------VVIK------------------- |
| 2Z1U Chain:A ((7-343)) | ----TLLLDYGSGGRASHRLISDLFLRHFDNPILGTLNDAARLDLTGPLAMSTDSYTVDPIFFPGGD-----------------IGTLAVHGTVNDVSMLGARPRYLSCGFILEEGLDMDILERVVASMGKAAREAGVFIVTGDTKVVPR-GACDKMFINTTGIGEILVDPAPSGDRARPGDAILISGSMGDHGLTILSQRQ------GLNFAADVCS----DS--ASLNRVVEKLVLEVGD--IHVLRDPTRGGLATTLNEIAGQSQAVCHVLETA---VPVRESVRNGCSFLGLDPLYLANEGK-LICILPEERAEAALAVLREGPHGEHAARIGSVKSVGELGAARAGQVVMETALGGHRLLSMLEQLPRIC |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Z1U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -138320 for 2601 contacts (-53.2/contact) +
2D Compatibility (PS) -31191 + (NN) -1457 + (LL) 3256
1D Compatibility (HY) -7600 + (ID) 2850
Total energy: -178162.0 ( -68.50 by residue)
QMean score : 0.420
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