Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKHYQTIIIGAGAAGIGFGSAMQRL--GLTNFLIIEKG-HIGESFLRWPRTTQFITPSFTTNGFGFPDLNAVIPDTSPAFSFEKEHLSGVEYARYLQLVAAHYNLPIQNETSVLSIDKRDSLFVIK--TSKGDFSADYLIMATGEFQNPNTIDIKGADL--GMHYGQVDNF--H-IKSDNPFIIIGGNESACDALTHLVYLGNQVELYTDTFGRKESNPDPSISLSPLTKERLKHIQDHKKEYYSISEGKKAIEIKQIGKQYQVTFDDGSTAESFHKPILSTGFLNTCHLIDGIALFEYDKNQLPIVTEDDESTIVNNCFLIGPSLRQRDTI------FCYIYKFRQRFVPVINHIAQREGIILDEDTLEFFKENQMYLDNLACCDVNCDC |
| 3OC4 Chain:A ((3-314)) | ---LKIVIIGASFAGISAAIASRKKYPQA-EISLIDKQATVGYLSG----------------------------------------------RYITEEELRRQKIQLLLNREVVAMDVENQLIAWTRKEEQQWYSYDKLILATGA--SQFSTQIRGSQTEKLLKYKFLS--AVPLLENSQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLPKY------FDKEMVAEVQKSLEK--QAVIFHFEETVLGIEETANGIVLE-TSE-QEISCDSGIFALNLHPQLAY--LDKKIQRNLDQTIAVDAYLQ-TSVPNVFAIGDCISVMNEPVAETFYAPLVNNAVRTGLVVANNLEEKTHRFIGSLRTMGTKVGDYYLASTGLTETEGLF |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OC4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -152428 for 2195 contacts (-69.4/contact) +
2D Compatibility (PS) -29709 + (NN) -5961 + (LL) 2680
1D Compatibility (HY) -10800 + (ID) 2150
Total energy: -198368.0 ( -90.37 by residue)
QMean score : 0.374
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