Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTNIITVNNLFFKYDSNQTHYQL-ENVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQIIIDG-------------QELTEDNVWELRHK-IGMVFQNPDNQFVGATVEDDVAFGLE---NKGIPLKDMKERVDQALDLVGMSEFKM-REPARLSGGQKQRVAIAGAVAM-RPQVIILDEATSMLDPEGRLELIRTIRAIRQKYNLTVISITHDLDEVAL-SDRVIVMKN-GKVESTSTPKALFGRGNRLISLGLDVPFTSRLMAELAANGLDIGTEYLTEKELEEQLWELNLKM |
| 1B0U Chain:A ((5-261)) | --NKLHVIDLHKRYGG---HEVLK-GVSLQARAGDVISIIGSSGSGKSTFLRCINFLEKPSEGAIIVNGQNINLVRDKDGQLKVADKNQLRLLRT-RLTMVFQHF-NLWSHMTVLENVMEAPIQVL--GLSKHDARERALKYLAKVGIDERAQGKYPVHLSGGQQQRVSIARALAME-PDVLLFDEPTSALDPELVGEVLRIMQQLAEE-GKTMVVVTHEMGFARHVSSHVIFLH-QGKIEEEGDPEQVFGNP-Q---------------------SPRLQQFLKGSLKKLEH-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1B0U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -106514 for 1867 contacts (-57.1/contact) +
2D Compatibility (PS) -26330 + (NN) -11774 + (LL) 3132
1D Compatibility (HY) -13200 + (ID) 4150
Total energy: -158836.0 ( -85.08 by residue)
QMean score : 0.483
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