Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIICKTPRELGIMREAGRIVALTHEELKKHIKPGISTKELDQIAERFIKKQGAIPSFKGYNGFRGSICVSVNEELVHGIPGSRVLKDGDIISIDIGAKLNGYHGDSAWTYPVGNISDDDKKLLEVTEESLYKGLQEAKPGERLSNISHAIQTYVENEQFSVVREYVGHGVGQDLHEDPQIPHYGPPNKGPRLKPGMVLAIEPMVNAGSRYVKTLADNWTVVTVDGKKCAHFEHTIAITETGFDILTRV
2B3H Chain:A ((74-318))
--KLLSSEDIEGMRLVCRLAREVLDVAAGMIKPGVTTEEIDHAVHLACIARNCYPSPLNYYNFPKSCCTSVNEVICHGIPDRRPLQEGDIVNVDITLYRNGYHGDLNETFFVGEVDDGARKLVQTTYECLMQAIDAVKPGVRYRELGNIIQKHAQANGFSVVRSYCGHGIHKLFHTAPNVPHYAKNKAVGVMKSGHVFTIEPMICEGGWQDETWPDGWTAVTRDGKRSAQFEHTLLVTDTGCEILTR-
General information:
TITO was launched using:
RESULT:
Template:
2B3H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -88350 for 2151 contacts (-41.1/contact) +
2D Compatibility (PS) -26947 + (NN) -12913 + (LL) 604
1D Compatibility (HY) -14800 + (ID) 4750
Total energy: -147156.0 ( -68.41 by residue)
QMean score : 0.560
(partial model without unconserved sides chains):
PDB file :
Tito_2B3H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2B3H-query.scw
PDB file :
Tito_Scwrl_2B3H.pdb
: