Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSYGDSREKILSAATRLFQLQGYYGTGLNQIIKESGAPKGSLYYHFPGGKEQLAIEAVNEMKEYIRQKIADCMEA-CTDPAEGIQAFLKELSCQFSCTEDIEGLPVGLLAAETSLKSEPLREACHEAYKEWASVYEEKLRQT----GC-SESRAKEASTVVNAMIEGGILLSLTAKNSTPLLHISSCIPDLLKR
4YZE Chain:A ((7-193))---HDTREHLLATGEQLSLQRGFTGMGLSELLKTAEVPKGSFYHYFR-SKEAFGVAMLERHYAAYHQRLTELLQSGEGNYRDRILAYYQQTLNQFSQHGTISGCLTVKLSAEVSDLSEDMRSAMDKGARGVIALLSQALENGRENHSLTFSGEPLQQAQVLYALWLGANLQAKISRSFEPLENALAHVKNI---


General information:
TITO was launched using:
RESULT:

Template: 4YZE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 658 -75267 -114.39 -415.84
target 2D structure prediction score : 0.76
Monomeric hydrophicity matching model chain A : 0.75

3D Compatibility (PKB) : -114.39
2D Compatibility (Sec. Struct. Predict.) : 0.76
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.469

(partial model without unconserved sides chains):
PDB file : Tito_4YZE.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4YZE-query.scw
PDB file : Tito_Scwrl_4YZE.pdb: