Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVVGDFPIETDTLVIGAGPGGYVAAIRAAQLGQKVTVVEKAT-LGGVCLNVGCIPSKALINAGHRYENAKHSDD---MGITAENVTVDFTKVQEWKASVVNKLTGGVAGLLK--GNKVDVVKGEAYFVD---------SNSVRVMDENSAQTYTFKNAIIATGSRPIELPNFKYSER-----VLNSTGALALKEI--PKKLVVIGGGYIGTELGTAYANFGTELVILEGGDEILPGFEKQMSSLVTRRLKKKGNVEIHTNAMAKGVEERPDGVTVTFEVKG---EEKTVDADYVLITVGRRPNTDELGLEQVGIEMTDRGIVKTDKQCRTNVPNIYAIGDIIEGP-PLAHKASYEGKIAAEAIAGEPAE-----IDYLGIPAVVFSEPELASVGYTEAQAKEEGLDIVAAKFPFAANGRALSLNETDGFMKLITRKEDGLVIGAQIAGAS-ASDMISELSLAIEGGMTAEDIAMTIHAHP---TLGEITMEAAEVAIGSPIHIVK
1EBD Chain:A ((1-455))------AIETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG-NLGGVCLNVGCIPSKALISASHRYEQAKH-SEEMGIKAE--NVTIDFAKVQEWKASVVKKLTGGVEGLLKGNK-VEIVK-GEAYFV-DANTVRVVN--------GDSAQTYTFKNAIIATGSRPIELPNFKFS--NRILD---STGALNLG--EVPKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILSGFEKQMAAIIKKRLKKKG-VEVVTNALAKGAEERE-DGVTVTYEANGET-KTID-ADYVLVTVGRRPNTDELGLEQIGIKMTNRGLIEVDQQCRTSVPNIFAIGDIVPG-PALAHKASYEGKVAAEAIAG----HPSAVDYVAIPAVVFSD-PECASVGYFEQQAKDEGIDVIAAKFPFAANGRALALNDTDGFLKLVVRKEDGVIIGAQIIG-PNASDMIAELGLAIEAGMTAEDIALT--IHAHPT-LGEIAMEAAEVAL--------


General information:
TITO was launched using:
RESULT:

Template: 1EBD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2413 -286447 -118.71 -682.02
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.87

3D Compatibility (PKB) : -118.71
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.87
QMean score : 0.543

(partial model without unconserved sides chains):
PDB file : Tito_1EBD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1EBD-query.scw
PDB file : Tito_Scwrl_1EBD.pdb: