Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNNTKQPVVILVGPTAVGKTNLSIQLAKSLNAEIISGDSMQIYKGMDIGTAKITEQEMEGVPHHLIDILDPQDSFSTADYQSLVRNKISEIANRGKLPMIVGGTGLYIQSVLYDYTFTEEANDPVFRESMQMAAEREGADFLHAKLAAADPEAAAAIHPNNTRRVIRALEILHTSGKTMSQHLKEQKRELLYNAVLIGLT-MDRDTLYERINQRVDLMMQSGLLPEVKRLYDKN-VR-DCQSIQAIGYKELYAYFDGFVTLSDAVEQLKQNSRRYAKRQLTWFRNKMQV-TWFDMTPPVDMELKKKEIFTHIAGKLEL
3FOZ Chain:A ((7-301))--ASLPKAIFLMGPTASGKTALAIELRKILPVELISVDSALIYKGMDIGTAKPNAEELLAAPHRLLDIRDPSQAYSAADFRRDALAEMADITAAGRIPLLVGGTMLYFKALLEGLSP-LPSADPEVRARIEQQAAEQGWESLHRQLQEVDPVAAARIHPNDPQRLSRALEVFFISGKTLTELTQTSGDALPYQVHQFAIAPASRELLHQRIEQRFHQMLASGFEAEVRALFARGDLHTDLPSIRCVGYRQMWSYLEGEISYDEMVYRGVCATRQLAKRQITWLRGW-EGVHWLDSEKPE-------------------


General information:
TITO was launched using:
RESULT:

Template: 3FOZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1313 -149254 -113.67 -512.90
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain A : 0.78

3D Compatibility (PKB) : -113.67
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.574

(partial model without unconserved sides chains):
PDB file : Tito_3FOZ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3FOZ-query.scw
PDB file : Tito_Scwrl_3FOZ.pdb: