Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKPINIQDQFLNQIRKENTYVTVFLLNGFQLRGQVKGFDNFTVLLESEGKQQLIYKHAISTFAPQKNVQLELE
4NL2 Chain:D ((4-73))-GGQGLQDYYLNQLRKEKILATVFLTNGFQLRGRVVSFDNFTVLLDVEGKQQLVFKHAISTFSPQKNVALN--


General information:
TITO was launched using:
RESULT:

Template: 4NL2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 248 -40098 -161.69 -572.83
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain D : 0.88

3D Compatibility (PKB) : -161.69
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.88
QMean score : 0.515

(partial model without unconserved sides chains):
PDB file : Tito_4NL2.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4NL2-query.scw
PDB file : Tito_Scwrl_4NL2.pdb: