Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTSLQGKVVFITGAARGIGAEVARRLHNKGAKLVLTDLSKSELAVMGAELGGDDRLLTVVADVRDLPAMQAAAETAVERFGGIDVVVANAGIASY-GSVLKVDPQAFRRVLDVNLLGNFHTVRATLPALIDR-----RGYVLIVSSLAAFAAPPGMAPYNMSKAGNEHFANALRLEVAHLGVSVGSAHMSWIDTALVRDTKADLPAFAELLARLPWPLNKTTSVNKCAAAFVNGIEGRKDRVYCPGWVALFRWLKPLLSTRVGQRPIRNTVAKLMPQMDAEVAALGRFASAYTESLENS |
3N74 Chain:A ((1-235)) | -MSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIG-DA-ALAVAADISKEADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAWYNATKGWVVSVTKALAIELAPAKIRVVALNPV-------------------------IPMGRLLKPDDLAEAAAFLCSPQ------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3N74.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -145827 for 1726 contacts (-84.5/contact) +
2D Compatibility (PS) -22413 + (NN) -10319 + (LL) 7020
1D Compatibility (HY) -10400 + (ID) 3150
Total energy: -185089.0 ( -107.24 by residue)
QMean score : 0.539
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