Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTPYEDLLRFVLETGTPKSDRTGTGTRSLFGQQMRYDLSAGFPLLTTKKVHFKSVAYELLWFLRGDSNIGWLHEHGVTIWDEWASD------------TGELGPIYGVQWRSWPAPS----------------------------------GEHIDQISAALDLLRTDPDSRRIIVSAWNVGEIERMALPPCHAFFQFYVAD--GRLSCQLYQRSADLFLGVPFNIASYALLTHMMAAQAGLSVGEFIWTGGDCHIYDNHVEQVRLQLSREPRPYPKLLLADR------------DSIFEYTYEDIVVKNYDPHPAIKAPVAV |
3V8H Chain:A ((5-318)) | MKQYLDLVRTILDTGTWQSN--GIRTIGIPGAMLRFDLQQGFPAVTTKKLAFKSAIGELVGFLRATRSAAEFRALGCKVWDANANENAQWLANPYRRGADDLGDVYGVQWRRWPGYKVLDAHADAQIADATSRGFRIVARFEEGGADKVLLHKAIDQLRDCLDTIVRDPSSRRILFHGWNPAVLDEIALPACHLLYQFLPNVERREISLCLYIRSNDVGLGTPFNLAEGAALLTLVGRLTGYSPRWFTYFIGDAHIYENQLDMLKQQLEREPFESPRLELAERVPDYAKTGKYEPQWLERVEPSDFTLVGYRHH--------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3V8H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -192786 for 2019 contacts (-95.5/contact) +
2D Compatibility (PS) -26824 + (NN) -11581 + (LL) 956
1D Compatibility (HY) -18000 + (ID) 5050
Total energy: -253285.0 ( -125.45 by residue)
QMean score : 0.559
|
|
|