Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGKGSMTAHATPNEPDYPPPPGGPPPPADIGRLLLRCHDRPGIIAAVSTFLARAGANIISLDQHSTAPEGGTFLQRAIFHLPGLTAAVDELQRDFGSTVADKFGIDYRFAEAAKPKRVAIMASTEDHCLLDLLWRNRRGELEMSVVMVIANHPD--LAAHVRPFGVPFIHIPATR-DTRTEAEQRQLQLLS-GNVDLVVLARYMQILSPGFLEAIGCPLINIHHSFLPAFTGAAPYQRARERGVKLIGATAHYVTEVLDEGPIIEQDVVRVDHTHTVDDLVRVGADVERAVLSRAVLWHCQDRVIVHHNQTIVF |
| 4S1N Chain:A ((4-183)) | ------------------------------------------------------------------------------------------------------------------MKKIAVFASGNGSNFQVIAEE-------FPVEFVFSDHRDAYVLERAKQLGVLSYAFELKEFESKADYEAALVELLEEHQIDLVCLAGYMKIVGPTLLSAYEGRIVNIHPAYLPEFPGAHGIEDAWNAGVGQSGVTIHWVDSGVDTGQVIKQVRVPRLADDTIDRFEARIHEAEYRLYPEVVKALFT------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4S1N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -170009 for 1353 contacts (-125.7/contact) +
2D Compatibility (PS) -19145 + (NN) -8841 + (LL) 6408
1D Compatibility (HY) -12800 + (ID) 2400
Total energy: -206787.0 ( -152.84 by residue)
QMean score : 0.557
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