Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRVILLGAPGAGKGTQARFITEKFGIPQISTGDMLRAAVKAGSPLGQQVKGVMDSGGLVSDDIIIALIKERITEADCAKGFLFDGFPRTIPQAEALKDA----GVTIDHVVEIAVDDEEIVSRIAGRRVHPASGRVYHTEHNPPKVAGKDDVTGEELIQREDDKEETVRHRLSVYHSQTKPLVDFYQKLSAAEGTPKYHSIAGVGSVEQITAKVLSALS
3TLX Chain:A ((30-241))
GRYIFLGAPGSGKGTQSLNLKKSHCYCHLSTGDLLREAAEKKTELGLKIKNIINEGKLVDDQMVLSLVDEKLKTPQCKKGFILDGYPRNVKQAEDLNKLLQKNQTKLDGVFYFNVPDEVLVNRISGRLIHKPSGRIYHKIFNPPKVPFRDDVTNEPLIQREDDNEDVLKKRLTVFKSETSPLISYYKNKNL------LINLDATQPANDLEKKISQHI-
General information:
TITO was launched using:
RESULT:
Template:
3TLX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -87640 for 1598 contacts (-54.8/contact) +
2D Compatibility (PS) -22703 + (NN) -10990 + (LL) 24
1D Compatibility (HY) -18800 + (ID) 4150
Total energy: -144259.0 ( -90.27 by residue)
QMean score : 0.502
(partial model without unconserved sides chains):
PDB file :
Tito_3TLX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TLX-query.scw
PDB file :
Tito_Scwrl_3TLX.pdb
: