Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVFQHDIYAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPR---HPRIRREELDITDSQRLQRLFEAL----PRLDVLVNNAGISRD----REEYDLATFERVLRLNLSAAMLASQLARPLLAQ-RGGSILNIASMYSTFGSADRPAYSASKGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKADVEATRRIMQRTPLARWGEAPEVASAAAFLCGPGASFVTGAVLAVDGGYLCA
3TZQ Chain:B ((7-252))
-----AELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAYDMSTAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLE---PQ-PIVDIFATHHLAGRIGEPHEIAELVCFLASDRAAFITGQVIAADSGLLA-
General information:
TITO was launched using:
RESULT:
Template:
3TZQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -139072 for 1963 contacts (-70.8/contact) +
2D Compatibility (PS) -25446 + (NN) -14332 + (LL) 1100
1D Compatibility (HY) -10400 + (ID) 3400
Total energy: -191550.0 ( -97.58 by residue)
QMean score : 0.625
(partial model without unconserved sides chains):
PDB file :
Tito_3TZQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TZQ-query.scw
PDB file :
Tito_Scwrl_3TZQ.pdb
: