Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRDTRFPCLCGIAASTLLFATTPAIAGEAPADRLKALVDAAVQPVMKANDIPGLAVAISLKGEPHYFSYGLASKEDGRRVTPETLFEIGSVSKTFTATLAGYALTQDKMRLDDRASQHWPALQGSRFDGISLLDLATYTAGG-LPLQFPDSVQKDQAQIRDYYRQWQPTYAPGSQRLYSNPSIGLFGYLAARSLGQPFERLMEQQVFPALGLEQTHLDVPEAALAQYAQGYGKDDRPLRVGPGPLDAEGYGVKTSAADLLRFVDANLHPERLDRPWAQALDATHRGYYKVGDMTQGLGWEAYDWPISLKRLQAGNSTPMALQPHRIARLPA------PQALEGQRLLNKTGSTNGFGAYVAFVPGRDLGLVILANRNYPNAERVKIAYAILSGLEQQGKVPLKR
3W8K Chain:A ((28-379))-------------------------------DPLRPVVDASIQPLLKEHRIPGMAVAVLKDGKAHYFNYGVANRESGASVSEQTLFEIGSVSKTLTATLGAYAVVKGAMQLDDKASRHAPWLKGSVFDSITMGELATYSA-GGLPLQFPEEVDS-SEKMRAYYRQWAPVYSPGSHRQYSNPSIGLFGHLAASSLKQPFAQLMEQTLLPGLGMHHTYVNVPKQAMASYAYGYSKEDKPIRV--GMLADEAYGIKTSSADLLAFVKANIGGVD-DKALQQAISLTHKGHYSVGGMTQGLGWESYAYPVTEQTLLAG---------NSAKVILEANPTAAPR----QVLFNKTGSSNGFGAYVAFVPARGIGIVMLANRNYPIPARVKAAHAILAQLA---------


General information:
TITO was launched using:
RESULT:

Template: 3W8K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -192379 for 3066 contacts (-62.7/contact) +
2D Compatibility (PS) -36866 + (NN) -25377 + (LL) 2876
1D Compatibility (HY) -34800 + (ID) 9700
Total energy: -296246.0 ( -96.62 by residue)
QMean score : 0.546

(partial model without unconserved sides chains):
PDB file : Tito_3W8K.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3W8K-query.scw
PDB file : Tito_Scwrl_3W8K.pdb: