Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSSTIHPLPSFGLGTFRLTG-QVVVDSVRSALELGYRAIDTAQIYGNEADIGRAIAESGVPRSELFLTTKVWVDNYAREKLLASLRESLEKLRTDRLDLVLIHWPAPGNGVELGEYMAALAEAKSLGLTRRIGVSNFNIELTRQAIAAVGAGEISTNQIELSPYLQNRALTAYLEEQGIAVTSYMTLAYGKVLKDPTLAGIAARHRATVAQVALAWAMQLGYAVIPSSTRRENLASN-LLARDLRLDAEDMARIAGLERNGREVS-PQGLAPAWD |
| 1VBJ Chain:A ((14-278)) | -LSNGVMMPVLGFGMWKLQDGNEAETATMWAIKSGYRHIDTAAIYKNEESAGRAIASCGVPREELFVTTKLWNSDQGYESTLSAFEKSIKKLGLEYVDLYLIHWPGKD---KFIDTWKAFEKLYADKKVRAIGVSNFHEHHIEELLKHCK-VAPMVNQIELHPLLNQKALCEYCKSKNIAVTAWSPLGQGHLVEDARLKAIGGKYGKTAAQVMLRWEIQAGVITIPKSGNEARIKENGNIFD-FELTAEDIQVIDGMNAGHRYGPDPEVFM---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VBJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -128406 for 2257 contacts (-56.9/contact) +
2D Compatibility (PS) -28798 + (NN) -15247 + (LL) 300
1D Compatibility (HY) -16400 + (ID) 4600
Total energy: -193151.0 ( -85.58 by residue)
QMean score : 0.538
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