Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLTLFRDYPNGRYAMTFDVIIVGGSYAGISAGMQLARARR-RVLVMDTGLRRNRFAR--ASHGFLGQD-GRDPAAIADDARAQLLAYPSVEWLSEAAVAAKK-EADGFVVKAANGERFTARRLILASGVADELPEIPGLAERWGRHVFHCPYCHGYELDGGPIGVLAASPLAIHHALMLPDWGA-TTFFLNGVF--EPDAEQMSRLDRRGVTIERE-AVVALGGAR-----ADVTLASGR--TITLAGLFTQPRTRMASPLAAL----LGCEFEDGPSGPFIRTDGMRETSVPGVFACGDAAL-AAGNVAIAVGDGARTGGAAHHSLLFR |
| 3R9U Chain:A ((1-314)) | -------------SNAMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEKGMPGGQITSSSEIENYPGVAQVMDGISFMAPWSEQCMRFGLKHEMVGVEQILKNSDGSFT-IKLEGGKTELAKAVIVCTGSAPKKAGFKGEDEFFGKGVSTCATCDGFFYKNKEVAVLGGGDTALEEALYLANICSKIYLIHRRDEFRAAPSTVEKVKKNEKIELITSASVDEVYGDKMGVAGVKVKLKDGSIRDLNVPGIFTFVGLNVRNEILKQDDSKFLCNMEE--GG-QVSVDLKMQTSVAGLFAAGDLRKDAPKQVICAAGDGAVAALSAMAYIESL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3R9U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -166818 for 2481 contacts (-67.2/contact) +
2D Compatibility (PS) -30493 + (NN) -5355 + (LL) 372
1D Compatibility (HY) -12000 + (ID) 3200
Total energy: -217494.0 ( -87.66 by residue)
QMean score : 0.405
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