Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSELNLTTDEARVSYGIGRQLGDQLRENPVPGMTLDAVLAGLSDAFAGIDSRVSGEALSASFQVIRERMQAEAQAKAEAAAGEGRAYLAENAKREGVTVLPSGLQFEVLSTGEGAK-PSREDTVRTHYHGTLIDGTVFDSSYQRGQPAEFPVG--GVIAGWVEALQLMNAGSKWRLHVPSELAYGGQAV-GSIPPHSVLVFDVELLEIL |
| 1YAT Chain:A ((3-113)) | --------------------------------------------------------------------------------------------------VIEGNVKIDRISPGDGATFPKTGDLVTIHYTGTLENGQKFDSSVDRGSPFQCNIGVGQVIKGWDVGIPKLSVGEKARLTIPGPYAYGPRGFPGLIPPNSTLVFDVELLKVN |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YAT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -61604 for 796 contacts (-77.4/contact) +
2D Compatibility (PS) -11341 + (NN) 332 + (LL) 6828
1D Compatibility (HY) -8800 + (ID) 2350
Total energy: -76935.0 ( -96.65 by residue)
QMean score : 0.548
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