Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIKRVVIFGGTGFIGKHIVRRLATAGYLIRVFVRNQEKA-A-CLKLCGNLGQISIFKGDFFDEKLILESVE--ECNVVINLVGILYEV----KEHSFYAVHVGIAEKIARAAKIKN-VSMMIHFSAMGIENS-----------------------------KLSEYAQSKLKGEKAVTA----AFPEAIIIKPSLVFGKEDN------FFTKFARL-AT---I-LPFLPLIGSGTTKFQPICVTDLAEMVYRIINLN-KQDKKIYNIGGP--KIYSFKSLLKFILNVTNRKCLLVNVSFPMAKLIAFFLESRIISILLKPITGDISPMLTRDQVRVMMSSSIEK-STDFEAIKIRPL-SIENVVPEYLKVYKKY |
| 1ORR Chain:A ((2-337)) | --AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFTNLP---------------------------VR--E-----SDQRVFVADIKKITNAIDWSPKVSAKDGVQKMYDWTSSI |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ORR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -205175 for 2356 contacts (-87.1/contact) +
2D Compatibility (PS) -29998 + (NN) -11049 + (LL) 3852
1D Compatibility (HY) -7600 + (ID) 2400
Total energy: -252370.0 ( -107.12 by residue)
QMean score : 0.438
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