Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTNLRTDIRNVAIIAHVDHGKTTLVDELLKQSHTLDERKELEERAMDSNDIEKERGITILAKNTAVAYN-----------------------DVRINIMDTPGHADFGGEVERIMKMVDGVVLVVDAYEG-TMPQTRFVLKKALEQN-LIPIVVVNKIDKPSAR-PSEVVDEVLELFIELGADDDQLDFPVVYASAINGTSSMSDDPLDQEKTMAPIFDTIIDHIPAPVDNSEEPLQFQVSLLDYND----FVGRIGIGRVFRGTVKVGDQVTLSKLDGT---------TKNFRVTKLFGFFGLERKEIQEAKAGDLIAV-SG----ME--DIFVGETVTPTDDIEPLPVLRIDEPTLQMTFLVNNSPFAGREGKWITSRKVEERLLAELQTDVSLRVDPTDSPDKWTVSGRGELHLSILIETMRREGYELQVSRPEVIIKEIDGVQCEPFERVQIDTPEEYQGAIIQSLSERKGDMLDMQMVGNGQTRLIFLIPARGLIGYSTEFLSMTRGYGIMNHTFDQYLPVVQGEIGGRHRGVLVSIENGKATTYSIMRIEERGTIFVNPGTEVYEGMIVGENSRDNDLGVNITTAKQMTNVRSATKDQTAVIKTPRILTLEESLEFLADDEYMEVTPESIRLRKQILNKAARDKANKKKKSAE |
| 1KK1 Chain:A ((6-315)) | ---SRQAEVNIGMVGHVDHGKTTLTKALTGV-------------WTD--SEELRRGITIKIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYRQIKEFIEGTV----AENAPIIPISALHG------------ANIDVLVKAIEDFIPTPKRDPNKPPKMLVLRSFDVNKPGKLVGGVLDGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQAG----GQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLERVVEQELKVEPIKRKEVLLLNVGTARTMGLVTGLGKDEIEVKLQIPVCAEPGDRVAISRQIGSRWRLIGYGIIKE-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KK1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -129197 for 2096 contacts (-61.6/contact) +
2D Compatibility (PS) -27455 + (NN) -1464 + (LL) 16016
1D Compatibility (HY) -6800 + (ID) 3450
Total energy: -152350.0 ( -72.69 by residue)
QMean score : 0.600
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