Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAKKEFKAESKRLLDMMINSIYTQKEIFLRELISNSSDAIDKIYYKALTDDALTFDKDSYYIKVAADKDARTLTISDTGIGMTKDELEQHLGTIAKSGSLAFKKENELKDGHDIIGQFGVGFYAAFMVADVVTVISKALGSEEAYKWESAGADGYTIEPCE--KD-SVGTDIILKIKENTEDDSYDEFLEEYRLKAIIKKYSDFIRYPIKMDTTINKPKEGSENEFEEVQEEQTVNSMVPIWRKNKSELTDEDYEKFYAEKHYGFDKPLTHVHISVDGAVRYNAILFVPENMPFDYYSKEYEKGLELYSNGVLIMNKCADLLPDHFSFVKGMVDSEDLSLNISREMLQHDRQLKLIAKNISKKIKSELQSLLKKDREKY-ETFYKSFGRQLKFGVYNDFGANKDQLKDLLLFYSSK-EKKLVSLDEYVSRMPEEQKFIYYATGDSYDRIEKLPQTEMVADKGYEILYFTEDIDEFAIKMLASYQEKEFKSVSSGDLGIDTDED-QKQSEEEESKYKDLFEEMKN-ILSDKVKNVRISKRLKSHPVCLAADG-EVTIEMEKILNAMPDS-------Q-NVKAEKVLEINPNHEVFQTLQDAFEQ--DKEKLSLYTNLLYNQALLIEGLPIQDPVEFTNNICKVMV
2O1U Chain:A ((34-656))------------MMKLIINSLYKNKEIFLRELISNASDALDKIRLISLTDENALAGNEELTVKIKCDKEKNLLHVTDTGVGMTREELVKNLGT--------------------------VGFYSAFLVADKVIVTSKHNND-TQHIWESDS-NEFSVIADPRGNTLGRGTTITLVLKE----EAS-DYLELDTIKNLVKKYSQFINFPIYVWSSK-------------VWDWELMNDIKPIWQRPSKEVEDDEYKAFYKSFSKESDDPMAYIHFTAEGEVTFKSILFVPTSAPR---------YIKLYVRRVFITDDFHDMMPKYLNFVKGVVDSDDLPLNVSRETLQQHKLLKVIRKKLVRKTLDMIKKIAD---EKYNDTFWKEFGTNIKLGVIEDH-SNRTRLAKLLRFQSSHHPSDITSLDQYVERMKEKQDKIYFMAGSSRKEAESSPFVERLLKKGYEVIYLTEPVDEYCIQALPEFDGKRFQNVAKEGVKFDESEKTKESREAIEKEFEPLLNWMKDKALKDKIEKAVVSQRLTESPCALVASQYGWSGNMERIMKAQAYQTGKDISTNYYASQKKTFEINPRHPLIKDMLRRVKEDEDDKTVSDLAVVLFETATLRSGYLLPDTKAYGDRIERMLR


General information:
TITO was launched using:
RESULT:

Template: 2O1U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2710 63377 23.39 114.19
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.79

3D Compatibility (PKB) : 23.39
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.498

(partial model without unconserved sides chains):
PDB file : Tito_2O1U.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2O1U-query.scw
PDB file : Tito_Scwrl_2O1U.pdb: