Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTRTVLVLNGPNLNLLGTREPQTYGRRTLGEIADECAAFAETRGFAVDFRQTNQEGQLLDWIHQARGRVAGIVINPAAWTHTSVALRDALAAVE-LPVVEVHLSNVHQREAFRHHSYVSPVALGVICGFGSLGYRLALEHFAERFEAAA
1GTZ Chain:A ((5-150))
ANAPIMILNGPNLNLLGQAQPEIYGSDTLADVEALCVKAAAAHGGTVDFRQSNHEGELVDWIHEARLNHCGIVINPAAYSHTSVAILDALNTCDGLPVVEVHISNIHQREPFRHHSYVSQRADGVVAGCGVQGYVFGVERIAALAG---
General information:
TITO was launched using:
RESULT:
Template:
1GTZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -123698 for 1195 contacts (-103.5/contact) +
2D Compatibility (PS) -16018 + (NN) -4806 + (LL) 432
1D Compatibility (HY) -12800 + (ID) 3950
Total energy: -160840.0 ( -134.59 by residue)
QMean score : 0.654
(partial model without unconserved sides chains):
PDB file :
Tito_1GTZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1GTZ-query.scw
PDB file :
Tito_Scwrl_1GTZ.pdb
: