Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDRMKKIKRQLSMTLRGGRGIDKTNGAPEQIGLDESGGGGGSDPGEAPTRAAPGELRSARGPLSSAPEIVHEDLKMGSDGESDQASATSSDEVQSPVRVRMRNHPPRKISTEDINKRLSLPADIRLPEGYLEKLTLNSPIFDKPLSRRLRRVSLSEIGFGKLETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHT-EKSLTLVFEYLDKDLKQYLDD---CGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINE-RGELKLADFGLARAKSIPTKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPR-LDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGERIHKLPDTT--SIFALKEIQLQKEAS-LRSSSMPDSGRPAFRVVDTEF |
| 3EB0 Chain:A ((7-375)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------KKYSLGKTLGTG-FGIVCEVFDIESGKRFALKKVLQD-----PRYKNRELDIMKVLDHVNIIKLVDYFYTTNKYLNVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLI-PSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMN--PHY--VRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDHLRNS--------IPQLFNFSPYELSIIPGNVLNRILPK------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EB0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -148651 for 2330 contacts (-63.8/contact) +
2D Compatibility (PS) -32069 + (NN) -11139 + (LL) 7792
1D Compatibility (HY) -30000 + (ID) 5000
Total energy: -219067.0 ( -94.02 by residue)
QMean score : 0.485
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