Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKFKRRLSLTLRGSQTIDESLSELAEQMTIEENSSKDNEPIVKNGRPPTSHSMHSFLHQYTGSFKKPPLRRPHSVIGGSLGSFMAMPRNGSRLDIVHENLKMGSDGESDQASGTSSDEVQSPTGVCLRNRIHRRISMEDLNKRLSLPADIRIPDGYLEKLQINSPPFDQPMSRRSRRASLSEIGFGKMETYIKLEKLGEGTYATVYKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHT-DKSLTLVFEYLDKDLKQYMDD---CGNIMSMHNVKLFLYQILRGLAYCHRRKVLHRDLKPQNLLINE-KGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPSQETWPGISSNEEFKNYNFPKYKPQPLINHAPR-LDSEGIELITKFLQYESKKRVSAEEAMKHVYFRSLGPRIHALPESV--SIFSLKEIQLQKDPG-FRNSSYPETGHGKNRRQSMLF |
| 3EB0 Chain:A ((7-375)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KKYSLGKTLGTG-FGIVCEVFDIESGKRFALKKVLQD-----PRYKNRELDIMKVLDHVNIIKLVDYFYTTNKYLNVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLI-PSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMN--PHY--VRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDHLRNS--------IPQLFNFSPYELSIIPGNVLNRILPK------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EB0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -143634 for 2330 contacts (-61.6/contact) +
2D Compatibility (PS) -32242 + (NN) -10788 + (LL) 10240
1D Compatibility (HY) -30800 + (ID) 4900
Total energy: -212124.0 ( -91.04 by residue)
QMean score : 0.470
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