Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKMKNFKRRFSLSVPRTETIEESLAEFTEQFNQLHNRRNENLQLGPLGRDPPQECSTFSPTDSGEEPGQLSPGVQFQRRQNQRRFSMEDVSKRLSLPMDIRLPQEFLQKLQMESPDLPKPLSRMSRRASLSDIGFGKLETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDLIHT-DRSLTLVFEYLDSDLKQYLDH---CGNLMSMHNVKIFMFQLLRGLAYCHHRKILHRDLKPQNLLINE-RGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCIHYEMATGRPLFPGSTVKEELHLIFRLLGTPTEETWPGVTAFSEFRTYSFPCYLPQPLINHAPR-LDTDGIHLLSSLLLYESKSRMSAEAALSHSYFRSLGERVHQLEDT-ASIFSLKEIQLQKDPG-YRGLAFQQPGRGKNRRQSIF |
| 3EB0 Chain:A ((7-375)) | -------------------------------------------------------------------------------------------------------------------------------------------KKYSLGKTLGTG-FGIVCEVFDIESGKRFALKKVLQD-----PRYKNRELDIMKVLDHVNIIKLVDYFYTTNKYLNVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLI-PSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRM--NPHY--VRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDHLRNS-------IPQLFNFSPYELSIIPGNVLNRILPK------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EB0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -162767 for 2348 contacts (-69.3/contact) +
2D Compatibility (PS) -32332 + (NN) -13036 + (LL) 9060
1D Compatibility (HY) -28800 + (ID) 4750
Total energy: -232625.0 ( -99.07 by residue)
QMean score : 0.410
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