Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSFLIVANWKMNGTRSLFVNFIGKLNDKSNEITSKLVICPPFTSLPGNIELN--SNISIGAQNCHYKKSGSYTGEISAEMLKELGCTYVILGHSERTH---ETNGEIKLKSETAIESGLHPIICVGENLEDRESSKTKEVVEYQCKSRLPIH-----GEYTVAYEPIWAIGTGHVPSNNAIAEVIEVIQSYT---------SKKHVIYGGSVSLENIENLSNILNLSGVLIGSASLDFDRFHKIVQQVEKAY |
1YYA Chain:A ((2-249)) | RRVLVAGNWKMHKTPSEARVWFAELKRLLPPLQSEAAVLPAFPILPVAKEVLAETQVGYGAQDVSAHKEGAYTGEVSARMLSDLGCRYAIVGHSERRRYHGETDALVAEKAKRLLEEGITPILCVGEPLEVREKGEAVPYTLRQLRGSLEGVEPPGPEALVIAYEPVWAIGTGKNATPEDAEAMHQAIRKALSERYGEAFASRVRILYGGSVNPKNFADLLSMPNVDGGLVGGASLELESFLALLRIAG--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YYA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -146139 for 2009 contacts (-72.7/contact) +
2D Compatibility (PS) -24805 + (NN) -9266 + (LL) 312
1D Compatibility (HY) -14800 + (ID) 4050
Total energy: -198748.0 ( -98.93 by residue)
QMean score : 0.494
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