Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRKEIRNLKIASVLRRAISKVLMEGKVFNK---NVVISDVKLSGDLKKADVYIVLSSLSKKKYN---INTVVDEINQSAWLIRKSILSYVDLRFIPKLVFKADLAFDNFVNISKILSNYT
1JOS Chain:A ((7-106))
-----RSDRVAQEIQKEIAVILQRE-VKDPRIGMVTVSDVEVSSDLSYAKIFVTFLF----DHDEMAIEQGMKGLEKASPYIRSLLGKAMRLRIVPEIRFIYDQSLVEGM----------
General information:
TITO was launched using:
RESULT:
Template:
1JOS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -76358 for 617 contacts (-123.8/contact) +
2D Compatibility (PS) -10098 + (NN) -1011 + (LL) 1596
1D Compatibility (HY) -6000 + (ID) 1050
Total energy: -92921.0 ( -150.60 by residue)
QMean score : 0.690
(partial model without unconserved sides chains):
PDB file :
Tito_1JOS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JOS-query.scw
PDB file :
Tito_Scwrl_1JOS.pdb
: