Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLDKTTKNLLITEINKILPE--DSQNRLISAVRYVLLAPAKHIRPFLVVASSQVFNVE-IERVISIAMAVECIHTYSLIHDDLPCMDNSDTRRGQLSCHKRFDKATAVLAGDALLTLAFEILSSLNEGSNKRCEIIKA--LSQAIGAKGMVGGQILDIKTALHVIQHHDYLDPESSVINEHTRQLCNKNRTLGSCAKITPDSKIKEIHLMKTAKLFAASCEIGAIIGSATDKQRRALYNYGVNLGLIFQAKDDIRDYKQDEVNNLMSMLSKSEIENYIDNLFKQALDNLGELS-GDTNYLYNLLNQVKRDD |
3NPK Chain:A ((3-279)) | ---LNLKELFIHHLEKNLPKVESFHPFFNEALALMLKAGGKHFRAQLLLSVVQSNKPELLNQALDVALALEFIHTYSLIHDDLPAMDNADFRRGIPTLHKSYDETTAILVGDALNTEAFLVLSHAHLKDEIKIKLIKTLAFNAGL--NGMVIGQAIDCFFEDK----------------------------------RLSLNELEFLHTHKTARLIAAALKMGCEICELNNEESNQIYKLGLKLGLIFQINDDIIDVT----NSFVNLLGLEQAIKTKENLLNECEQDLEKLNEKLAQMIQNLIIQYL--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NPK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -139794 for 2062 contacts (-67.8/contact) +
2D Compatibility (PS) -26459 + (NN) -3560 + (LL) 2744
1D Compatibility (HY) -19200 + (ID) 4450
Total energy: -190719.0 ( -92.49 by residue)
QMean score : 0.528
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