Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRKFLSKTHHHTNPLWRVYRLVKFSKVFKNVIIIEFSKFIPSMVLKRHIYKQLLNINIGNQSSIAYKVMLDIFYPELITIGSNSVIGYNVTILTHEALVD-------EFRYGPVTIGSNTLIGANATILPGITIGDNVKVAAGTVVSKDIPDNGFAYGNPMYIKMIRR
3SRT Chain:A ((76-186))
------------------------------------------------------NIHVGENFFANYDCIF--LDVCKIEIGDNVMLAPNVQIYTAYHPIDAQLRNSGIEYGSPVKIGDNVWIGGGVIITPGITIGDNVVIGAGSVVTKDIPPNTVAVGNPCRVIKKI-
General information:
TITO was launched using:
RESULT:
Template:
3SRT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -83173 for 783 contacts (-106.2/contact) +
2D Compatibility (PS) -11211 + (NN) -2183 + (LL) 5544
1D Compatibility (HY) -8000 + (ID) 2150
Total energy: -101173.0 ( -129.21 by residue)
QMean score : 0.583
(partial model without unconserved sides chains):
PDB file :
Tito_3SRT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3SRT-query.scw
PDB file :
Tito_Scwrl_3SRT.pdb
: