Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTYNIVALPGDGIGPEILNGSLSLLEIISNKYNFNYQIEHHEFGGASIDTFGEPLTEKTLNACK-RADAILLGAIGGPKWTDPNNRPEQG-LLKLRKSLNLFANIRPTTVVKGASSLSPLKEERVEGTDLVIVRELTSGIYFGEPRHFN----NHEALDSLTYTREEIERIVHVAFKLAASR-------------RGKLTSVDKENVLA-SSKLWRKVVNEVS---QLYPEVTVNHLLVDACSMHLITNPKQFDVIVCENLFGDILSDEASVIPGSLGLSPSASFSNDGPRLYEPIHGSAPDIAGKNVANPFGMILSLAMCLRESLNQPDAADELEQHIYNMIEHG-QTTADLGGKLNTTDIFEILSQKLNH |
| 3TY4 Chain:A ((9-364)) | RRIVLGLIPADGIGKEVVPAARRLMENLPAKHKLKFDFIDLDAGWGTFERTGKALPERTVERLKTECNAALFGAVQSPTHKV---AGYSSPIVALRKKMGLYANVRPVKSLDGAK---------GKPVDLVIVRENTECLYVKEERMVQNTPGKRVAEAIRRISEEASTKIGKMAFEIAKSRQKIRESGTYSIHKKPLVTIIHKSNVMSVTDGLFRESCRHAQSLDPSYASINVDEQIVDSMVYRLFREPECFDVVVAPNLYGDILSDGAASLIGSLGLVPSANVGD-NFVMSEPVHGSAPDIAGRGIANPVATFRSVALMLEF-MGHQDAAADIYTAVDKVLTEGKVLTPDLGGKSGTNEITDAVLANI-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TY4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -187910 for 2896 contacts (-64.9/contact) +
2D Compatibility (PS) -36124 + (NN) -18899 + (LL) 88
1D Compatibility (HY) -23200 + (ID) 5550
Total energy: -271595.0 ( -93.78 by residue)
QMean score : 0.486
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