Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKIAKTAIISPKAEIGKGVEIGEFCVIGDGVKLDEGVKLHNNVTLQGHTFIGKNTEIFPFAVLGTQPQDLKYKGEYSELMVGEDNLIREFCMINPGTEGGIKKTLIGDKNLLMAYVHVAHDCVIGSHCILANGVTLAGHIEIGDYVNIGGLTAIHQFVRIAKGCMIAGKSALGKDVPPYCTVEGNRAFIRGLNRHRMRQL-LESKDIDFIHALYKRLFRPIPSLRESAKLELEEHANNPFVKEICSFILESSRGVAYKSSEYSSEEKQEE
2QIA Chain:A ((5-262))
SAFVHPTAIVEEGASIGANAHIGPFCIVGPHVEIGEGTVLKSHVVVNGHTKIGRDNEIYQFASIGEVNQDLKYAGEPTRVEIGDRNRIRESVTIHRGTVQGGGLTKVGSDNLLMINAHIAHDCTVGNRCILANNATLAGHVSVDDFAIIGGMTAVHQFCIIGAHVMVGGCSGVAQDVPPYVIAQGNHATPFGVNIEGLKRRGFSREAITAIRNAYKLIYRSGKTLDEVKPEIAELAETYPEVKAFTDFFARSTRGLIR-------------
General information:
TITO was launched using:
RESULT:
Template:
2QIA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -242034 for 2295 contacts (-105.5/contact) +
2D Compatibility (PS) -27708 + (NN) -5171 + (LL) 748
1D Compatibility (HY) -14800 + (ID) 5100
Total energy: -294065.0 ( -128.13 by residue)
QMean score : 0.519
(partial model without unconserved sides chains):
PDB file :
Tito_2QIA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QIA-query.scw
PDB file :
Tito_Scwrl_2QIA.pdb
: