Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKPIKTYDIKEEELAKTAYATIKTNKGNITLELFYKDAPQAVSNFVTLAKEGFYNGLNFHRVIAGFVAQGGCPYGTGTGGP---EHRIKCEVAHNPNKHQ-RGSISMAHAGRDTGGSQFFLCFVDLPHLDGEHTVFGKITSAESLSVLDKIKQGDIIES-VVFSPSL
2FU0 Chain:A ((5-150))
----------------PKSAIIYTTMGDIHISLFYKECKKTVQNFSVHSINGYYNNCIFHRVIKHFMVQTGDPSGDGTGGESIWGNEFEDEFF-DHLNHSKPFMVSMANCGPNTNGSQFFITTVPCPWLDFKHTVFGKVTQG--SKIVLDIEKVRTDKRDKPLEDIK
General information:
TITO was launched using:
RESULT:
Template:
2FU0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -80311 for 1051 contacts (-76.4/contact) +
2D Compatibility (PS) -15135 + (NN) -6933 + (LL) 1552
1D Compatibility (HY) -8000 + (ID) 2650
Total energy: -111477.0 ( -106.07 by residue)
QMean score : 0.487
(partial model without unconserved sides chains):
PDB file :
Tito_2FU0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FU0-query.scw
PDB file :
Tito_Scwrl_2FU0.pdb
: