Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKRQLGNAGLVTS--ELGFGCMGLNYHRGPAKDRNEMIEVVRTAMDAGITMFDTAEVYGPYTNEELVGEALVG---KRNHVQIATKGGFKINGLNNEVDSRPESIKAAVEGSLKRLKTDYIDLYYIHRIDPSIPIEEVAGTIQNLKQEGKILHWGLSEASAKTIRRAHKV------EPLAAVESEYSIWWREAEKEVFPVLEELGIGLVAYSPLGRGYLTGKLDINADFNANDNR---------GGLPRFQKEAMEANQVLL-DFMKEIADEQN---VTTAQLALAWILDQKP-----WIVPIPGTTRPSRIEENIASTE-IHFDDGARQKIADALSQIEIVGDRYSAAENKRIGK |
| 2BP1 Chain:A ((38-359)) | --------------RVASVLGTMEMGRR----MDAPASAAAVRAFLERGHTELDTAFMYSDGQSETILGGLGLGLGGGDCRVKIATKANPWD-----GKSLKPDSVRSQLETSLKRLQCPQVDLFYLHAPDHGTPVEETLHACQRLHQEGKFVELGLSNYASWEVAEICTLCKSNGWILPTVYQGMYNATTRQVETELFPCLRHFGLRFYAYNPLAGGLLTGKYKYEDKDGKQPVGRFFGNSWAETYRNRFWK---EHHFEAIALVEKALQAAYGASAPSVTSAALRWMYHHSQLQGAHGDAVILGMSSLEQLEQNLAATEEGPLEPAVVDAFNQAWHLVAHECPNYF--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2BP1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -110536 for 2448 contacts (-45.2/contact) +
2D Compatibility (PS) -30973 + (NN) -10524 + (LL) 1568
1D Compatibility (HY) -11600 + (ID) 3900
Total energy: -165965.0 ( -67.80 by residue)
QMean score : 0.478
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