Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIIFVWAQDRAGNIGKDNKMPWHLPGDLQFFKKTTTGKTLVMGRKTYESLG-KALPNRKTIVLTRDQGLKLDDAEILHSKEAVLALAE-TGEPIYIVGGAEIYRLFMDVADQLIVTKIDAEFEADTAFPEV-DWENFSEVAKEFHEKDEKNKYNYTFYTYERN
3IX9 Chain:A ((24-186))
KIVAIWAQDEEGVIGKDNRLPWYLPAELQHFKETTLNHAILMGRVTFDGMGRRLLPKRETLILTRNPEEKIDGVATFHDVQSVLDWYSAQEKNLYIVGGKQIFQAFEPYLDEVIVTHIHARVEGDTYFPAEFDLSLFETVSSKFYTKDEKNPYDFTIQYRKRK
General information:
TITO was launched using:
RESULT:
Template:
3IX9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -89429 for 1166 contacts (-76.7/contact) +
2D Compatibility (PS) -17318 + (NN) -4171 + (LL) 0
1D Compatibility (HY) -14000 + (ID) 3400
Total energy: -128318.0 ( -110.05 by residue)
QMean score : 0.609
(partial model without unconserved sides chains):
PDB file :
Tito_3IX9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IX9-query.scw
PDB file :
Tito_Scwrl_3IX9.pdb
: