Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VTYKITSLAGDGIGPEIMTSGLQVLEAVAKKYNHTFEIESHPFGGAGIDVAQDPIPSSTLKACQ-DADAILLGAIGGPKWDNAPKRPEDG-LLALRKALGLFANIRPIQVPSSITHLSPLKKEIVENTDFVVVRELTGGLYFGEPKHWD----ESAAVDSLTYTRAEIERIIEKAFEIAATR-------------NKKVTSVDKANVLA-SSKLWRKIAEEVA---SRHPDITLEHLYIDAAAMLMIQRPTTFDVIVTENLFGDILSDEASVITGSLGMLPSASHAENGPSLYEPIHGSAPDIANQNIANPMSMISSVSMMLRQSFSLFKEADAIDAAATRTMQAG-FLTADLGGNTTTTDFTNEVLKQIEGGE |
| 3TY4 Chain:A ((10-364)) | -RIVLGLIPADGIGKEVVPAARRLMENLPAKHKLKFDFIDLDAGWGTFERTGKALPERTVERLKTECNAALFGAVQSPTHKV---AGYSSPIVALRKKMGLYANVRPVKSLDGAK---------GKPVDLVIVRENTECLYVKEERMVQNTPGKRVAEAIRRISEEASTKIGKMAFEIAKSRQKIRESGTYSIHKKPLVTIIHKSNVMSVTDGLFRESCRHAQSLDPSYASINVDEQIVDSMVYRLFREPECFDVVVAPNLYGDILSDGAASLIGSLGLVPSANVGD-NFVMSEPVHGSAPDIAGRGIANPVATFRSVALMLEF-MGHQDAAADIYTAVDKVLTEGKVLTPDLGGKSGTNEITDAVLANI---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TY4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -160137 for 2885 contacts (-55.5/contact) +
2D Compatibility (PS) -36428 + (NN) -15834 + (LL) 680
1D Compatibility (HY) -24000 + (ID) 5300
Total energy: -241019.0 ( -83.54 by residue)
QMean score : 0.514
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