Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTDRKNLTTNQGVPVGDNQNSMTAGRKGPTLIEDYVLIEKLAHFDRERVPERVVHARGAGAHGKFVTKKSMKKYTMAKFLQEEGTETEVFARFSTVIHGQHSPETLRDPRGFSVKFYTEEGNYDFVGNNLPVFFIRDAIKFPDVIHSLKPDPRTNIQDGNRYWDFFSLTPEATTMIMYLFSDEGTPASYREVRGSSVHAFKWINEEGKTVYVKLRWVPKAGIVNLSTEQASQIQAKEFNHASRDLYEAIENGDYPEWDLYVQVLDPKDLDSFDFNPLDATKDWFEDVFPYEHVGTMTLDRNPDNIFAETESVGFNPGVLVRGMLPSEDRLLQGRLFSYSDTQRHRVGPNYLQLPINSPKAPVANNQRDGHMPFKQQTSSINYEPNSYDTEPKENPAFIEPEQEIRGD-ISGRLIAEKPNNFGHAKEVWDRYSNAERAALVKNIVDDWSQVR-EDIKIRNLRNFYQVDPEFASRVAAGTGINLEEHVTDLK |
| 2J2M Chain:A ((6-485)) | ----KKLTTNQGVPIGDNQNSRTAGRRGPTLLEDYQLIEKIAHFDRERVPERVVHARGFGAHGVFKVKNSMKKYTKAAFLQEEGTEVPVFARFSTVIHGTHSPETLRDPRGFSVKFYTEEGNWDFVGNNLPVFFIRDAMKFPDMVHSLKPDPRTNIQDPDRYWDFMTLRPESTNMLMHIFTDEGIPASYRKMRGSSVHSFKWVNAHGNTVYIKLRWVPKEGVHNLSADEATEVQGKDFNHASNDTFQAIENGDFPEWDLFVQVLDPADVENFDFDPLDATKDWFEDVIPFQHVGTMTLNKNVDNYFAETESVGFNPGVLVPGMLPSEDKLLQGRLFSYSDTQRHRIGPNYQQLPINCPFAQVNNYQRDGAMPFKQQTSSVNYEPNRYQDEPKQTPEYTEDTQPLHDDIHGRLEIEK-TNNFGQAGEVYRRMTEEEQMALLNNLVNDLQQVRHENTVLLAICNFYRADASLGEKLSEALNVDIKPF----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2J2M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -45764 for 3717 contacts (-12.3/contact) +
2D Compatibility (PS) -50471 + (NN) -22251 + (LL) 756
1D Compatibility (HY) -48400 + (ID) 16550
Total energy: -182680.0 ( -49.15 by residue)
QMean score : 0.468
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