Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAVKKVVTHPAEVLETPAETVTVFDKKLKKLLDDMYDTMLEMDGVGLAAPQIGILKRAAVVEIGDDR---GRIDLVNPEILEKSGEQ-TGIEGCLSFPNVYGDVTRADYVKVRAFNRQGKPFILEARGFLARAVQHEMDHLDGVLFTSKISKYYTEDELADMEG
3UWB Chain:A ((3-150))---LKIKTIGDRCLRQKSEEVEFDKKEMSELYDQMCEAMWASDGIGLAAPQVGINKRVIVVDETTEEHGKYAHLMVNPKITWKSEEKVLFDEGCLSVPDQNGEVLRPKSIKVTFQNKDGKYKKWKLDGLAARVVQHEIDHLEGILFVDYFN-------------


General information:
TITO was launched using:
RESULT:

Template: 3UWB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 720 -55845 -77.56 -387.81
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.75

3D Compatibility (PKB) : -77.56
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.505

(partial model without unconserved sides chains):
PDB file : Tito_3UWB.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3UWB-query.scw
PDB file : Tito_Scwrl_3UWB.pdb: