Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPGKSRIIFHIDMNSFYASVEMAYDPALRGKPVAVAGNVKERKGIVVTCSYEARARGVKTTMPVWQAKRHCPELIVLPPNFDRYRNSSRAMFTILREYTDLVEPVSIDEGYMDMTDTPYSS-RALETAKEIQSRLQKELLLPSSIGIAPNKFLAKMASDMKKPLGITILRKRQVPDILWPLPVGEMHGVGKKTAEKLKGLGIHTIGELAAADEHSLKRLLGINGPRLKNKANGIHHAPVDPERIYEFKSVGNSSTLSHDSSDEEELLGVFRKLAASVSDRLQRKE--VMASKLFIMIRYADWRTITRSTTLRNPIDQKNDILKEAEHLFFKHW-NKNPVRLLGITGTDLVEKEQAYKQLDLFSFNEDAKDEPIQQMMEKLNKKYGTKLIRKGATLKKEESKTKGTSFNKDFFQDEKKS
4Q45 Chain:F ((2-342))----SRKIIHVDMDCFFAAVEMRDNPALRDIPIAIGGSR-ERRGVISTANYPARKFGVRSAMPTGMALALCPHLTLLPGRFDAYKEASNHIREIFSRYTSRIEPLSLDEAYLDVTDSVHCHGSATLIAQEIRQTIFNELQLTASAGVAPVKFLAKIASDMNKPNGQFVITPAEVPAFLQTLPLAKIPGVGKVSAAKLEAMGLRTCGDVQACDLVMLLKRFGKFGRILWERSQGIDERDVNS--ERLRKSVGVERTMAEDIHHWSECEAIIERLYPELERRLAKVKPDLLIARQGVKLKFDDFQQTTQ--EHVWPRLNKADLIATARKTW-DERRGGRGVRLVGLHVTLLDP-------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4Q45.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain F - contact count / total energy / energy per contact / energy per residue : 1628 -28491 -17.50 -84.54
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain F : 0.75

3D Compatibility (PKB) : -17.50
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.485

(partial model without unconserved sides chains):
PDB file : Tito_4Q45.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4Q45-query.scw
PDB file : Tito_Scwrl_4Q45.pdb: