Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKTLVIVIHPNLE--TSVVNKTWMNRLKQE-KDITVHDLYGEY--PN------------------------------FIIDVEKEQQLLLDHERIVFQFPMYWYSSPALLKQWEDDVLTHGWAYGT----GGTKLHGKELLLAISLGAQESDYQAGGEYNITISELIR-PFQVTANYIGMRFLPAFTQYGTLHLSKEDVKNSAERLVDYLKAEH
1D4A Chain:A ((3-213))RRALIVLAHSERTSFNYAMKEAAAAALKKKGWEVVESDLYAMNFNPIISRKDITGKLKDPANFQYPAESVLAYKEGHLSPDIVAEQKKLEAADLVIFQFPLQWFGVPAILKGWFERVFIGEFAYTYAAMYDKGPFRSKKAVLSITTGGSGSMYSLQGI-HGDMNVILWPIQSGILHFCGFQVLEPQLTYSIGHTPADARIQILEGWKKRLEN--


General information:
TITO was launched using:
RESULT:

Template: 1D4A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 682 -5009 -7.34 -29.29
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : -7.34
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.552

(partial model without unconserved sides chains):
PDB file : Tito_1D4A.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1D4A-query.scw
PDB file : Tito_Scwrl_1D4A.pdb: